User Guide

Links to information related to installing NeuroCAPs using PyPI, GitHub, or Docker, in addition to information about the expected structure of the BIDS directory required for proper file querying, available parcellations for spatial dimensionality reduction, logging configurations for sequential and parallel processing, and the different output files of NeuroCAPs.

• Installation
  • Standard Installation
  • Development Version
  • Docker
• BIDS Structure and Entities
  • Entities
• Parcellations
  • Schaefer Parcellation
  • AAL Parcellation
  • Custom Parcellations
• Logging
  • Configuration (Without Parallel Processing)
  • Logging Configuration (With Parallel Processing)
• Outputs of NeuroCAPs
  • General File Naming Format
  • Exceptions to the Default Naming Scheme